STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF613Zinc finger protein 613. (615 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.748
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
      
 0.696
LIM2
Lens intrinsic membrane protein 2.
    
 0.657
ARHGAP39
Rho GTPase activating protein 39.
    
 
 0.644
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  0.634
ARID4B
AT-rich interaction domain 4B.
    
 0.622
FBXL6
F-box and leucine rich repeat protein 6.
    
 
 0.608
ZNF16
Zinc finger protein 16.
      
 0.586
VSIG10L
V-set and immunoglobulin domain containing 10 like.
      
 0.586
ZC3H6
Zinc finger CCCH-type containing 6.
    
 
 0.555
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.