Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERI3ERI1 exoribonuclease family member 3. (373 aa)    
Predicted Functional Partners:
PRNP
Prion protein.
    
 
 0.885
TRAPPC1
Trafficking protein particle complex 1.
   
  
 0.844
CCDC24
Coiled-coil domain containing 24.
      
 0.754
DAD1
Defender against cell death 1.
      
 0.724
UTP4
UTP4 small subunit processome component.
   
    0.693
CNOT3
CCR4-NOT transcription complex subunit 3.
    
   0.639
TRAPPC4
Trafficking protein particle complex 4.
   
  
 0.634
ENSCWAP00000019262
annotation not available
   
  
 0.634
GAPVD1
GTPase activating protein and VPS9 domains 1.
      
 0.628
ENSCWAP00000001923
annotation not available
      
 0.624
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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