Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM242Transmembrane protein 242. (139 aa)    
Predicted Functional Partners:
SCAF8
SR-related CTD associated factor 8.
      
 0.823
SERAC1
Serine active site containing 1.
      
 0.810
ENSCWAP00000004616
annotation not available
      
 0.807
TULP4
TUB like protein 4.
      
 0.773
TFB1M
Transcription factor B1, mitochondrial.
      
 0.747
SIAE
Sialic acid acetylesterase.
      
 0.722
TMEM126B
Transmembrane protein 126B.
   
  
 0.662
CRYZL1
Crystallin zeta like 1.
      
 0.631
TMEM70
Transmembrane protein 70.
      
 0.616
ENSCWAP00000027310
annotation not available
      
 0.610
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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