STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC39Leucine rich repeat containing 39. (334 aa)    
Predicted Functional Partners:
NINL
Ninein like.
    
   0.782
MIPOL1
Mirror-image polydactyly 1.
    
   0.769
ZNF574
Zinc finger protein 574.
    
 
 0.710
TOGARAM2
TOG array regulator of axonemal microtubules 2.
      
 0.701
FITM1
Fat storage inducing transmembrane protein 1.
   
  
 0.699
KRCC1
Lysine rich coiled-coil 1.
      
 0.675
MLIP
Muscular LMNA interacting protein.
   
  
 0.649
CNNM4
Cyclin and CBS domain divalent metal cation transport mediator 4.
    
 
 0.621
UBTD2
Ubiquitin domain containing 2.
      
 0.610
WASF2
WASP family member 2.
    
 0.604
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.