Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C6orf58Chromosome 6 open reading frame 58. (327 aa)    
Predicted Functional Partners:
CCDC127
Coiled-coil domain containing 127.
      
 0.763
ATP6V1FNB
ATP6V1F neighbor.
      
 0.754
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
      
 0.696
CST11
Cystatin 11.
      
 0.692
TMED1
Transmembrane p24 trafficking protein 1.
      
 0.676
ATAT1
Alpha tubulin acetyltransferase 1.
      
 0.654
ENSCWAP00000005135
annotation not available
      
 0.633
CFAP61
Cilia and flagella associated protein 61.
      
 0.630
CA6
Carbonic anhydrase 6.
   
  
 0.624
ENSCWAP00000028784
annotation not available
      
 0.618
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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