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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf58Chromosome 6 open reading frame 58. (327 aa)    
Predicted Functional Partners:
ATP6V1FNB
ATP6V1F neighbor.
      
 0.773
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
      
 0.760
CFAP61
Cilia and flagella associated protein 61.
      
 0.754
CCDC127
Coiled-coil domain containing 127.
      
 0.753
CST11
Cystatin 11.
      
 0.748
TMED1
Transmembrane p24 trafficking protein 1.
      
 0.739
DOK2
Docking protein 2.
      
 0.733
KIAA0408
KIAA0408.
      
 0.688
SPPL3
Signal peptide peptidase like 3.
      
 0.684
ENSCWAP00000005135
annotation not available
      
 0.682
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.