STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC136Coiled-coil domain containing 136. (1123 aa)    
Predicted Functional Partners:
ZNF385D
Zinc finger protein 385D.
    
 
 0.735
SPATA17
Spermatogenesis associated 17.
   
 0.666
CEP63
Centrosomal protein 63.
    
 
 0.607
KLHL17
Kelch like family member 17.
    
 0.604
DNAAF4
Dynein axonemal assembly factor 4.
    
 
 0.601
SLC12A6
Solute carrier family 12 member 6.
    
 
 0.598
ZFP14
ZFP14 zinc finger protein.
    
 
 0.597
CCDC86
Coiled-coil domain containing 86.
      
 0.586
GNGT2
G protein subunit gamma transducin 2.
      
 0.583
OPN1SW
Opsin 1, short wave sensitive.
      
 0.582
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.