STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNRC2Proline rich nuclear receptor coactivator 2. (139 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
    
 0.989
DCP2
Decapping mRNA 2.
    
 
 0.964
ENSCWAP00000029111
annotation not available
    
 0.922
ENSCWAP00000024367
annotation not available
    
 0.894
SMG8
SMG8 nonsense mediated mRNA decay factor.
     
 0.875
UPF1
UPF1 RNA helicase and ATPase.
    
 0.842
EDC3
Enhancer of mRNA decapping 3.
    
 
 0.839
EDC4
Enhancer of mRNA decapping 4.
    
 
 0.824
SMG9
SMG9 nonsense mediated mRNA decay factor.
     
 0.790
FUCA1
alpha-L-fucosidase 1.
      
 0.776
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.