STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF9TNF receptor superfamily member 9. (255 aa)    
Predicted Functional Partners:
TNFSF9
TNF superfamily member 9.
    
 0.998
TRAF1
TNF receptor associated factor 1.
   
 
 0.885
TRAF2
TNF receptor associated factor 2.
   
 
 0.885
TRAF3
TNF receptor associated factor 3.
   
 
 0.842
TNFRSF4
TNF receptor superfamily member 4.
   
 
 0.789
TBCCD1
TBCC domain containing 1.
      
 0.732
ENSCWAP00000007549
annotation not available
      
 0.696
CD28
CD28 molecule.
   
  
 0.692
GINS1
GINS complex subunit 1.
      
 0.685
CD247
CD247 molecule.
      
 0.682
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.