STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000005083TNFSF12-TNFSF13 readthrough. (322 aa)    
Predicted Functional Partners:
TNFRSF13B
TNF receptor superfamily member 13B.
    
 0.961
TNFRSF17
TNF receptor superfamily member 17.
    
 0.951
XPO1
Exportin 1.
     
  0.921
NUP214
Nucleoporin 214.
     
  0.853
TNFRSF12A
TNF receptor superfamily member 12A.
     
 0.839
TNFSF13B
TNF superfamily member 13b.
   
 
 0.820
TNFRSF13C
TNF receptor superfamily member 13C.
    
 0.776
ENSCWAP00000014413
annotation not available
     
  0.678
ENSCWAP00000027209
annotation not available
     
  0.678
ANP32E
Acidic nuclear phosphoprotein 32 family member E.
     
  0.676
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.