Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11orf88Chromosome 11 open reading frame 88. (168 aa)    
Predicted Functional Partners:
GTF2B
General transcription factor IIB.
   
 0.936
TAF9B
TATA-box binding protein associated factor 9b.
   
 0.923
ENSCWAP00000004297
annotation not available
    
 0.922
TAF10
TATA-box binding protein associated factor 10.
    
 0.922
TAF12
TATA-box binding protein associated factor 12.
    
 0.922
TAF2
TATA-box binding protein associated factor 2.
    
 0.922
TAF7L
TATA-box binding protein associated factor 7 like.
    
 0.922
TAF13
TATA-box binding protein associated factor 13.
    
 0.921
ENSCWAP00000015452
annotation not available
   
 0.919
GTF2E1
General transcription factor IIE subunit 1.
   
 0.919
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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