Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PARK7Parkinsonism associated deglycase. (189 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.988
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.986
ENSCWAP00000003047
annotation not available
    
 0.982
ENSCWAP00000028050
annotation not available
    
 0.982
SOD1
Superoxide dismutase 1.
  
 0.980
SNCA
Synuclein alpha.
    
 
 0.980
SOD3
Superoxide dismutase 3.
  
 0.978
PINK1
PTEN induced kinase 1.
    
 
 0.967
DAXX
Death domain associated protein.
    
 0.953
TPI1
Triosephosphate isomerase 1.
  
 
 0.945
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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