STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RXRGRetinoid X receptor gamma. (463 aa)    
Predicted Functional Partners:
PPARA
Peroxisome proliferator activated receptor alpha.
   
 0.993
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.989
PPARD
Peroxisome proliferator activated receptor delta.
    
 0.986
NCOA2
Nuclear receptor coactivator 2.
   
 0.986
MED1
Mediator complex subunit 1.
    
 0.985
NCOA1
Nuclear receptor coactivator 1.
   
 0.984
NCOA3
Nuclear receptor coactivator 3.
   
 0.983
NR1I3
Nuclear receptor subfamily 1 group I member 3.
    
 0.983
NR1H2
Nuclear receptor subfamily 1 group H member 2.
   
 0.979
NR1H3
Nuclear receptor subfamily 1 group H member 3.
   
 0.979
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.