STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000005151annotation not available (487 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
   
 0.999
SLC3A2
Solute carrier family 3 member 2.
    
 0.897
SLC7A9
Solute carrier family 7 member 9.
  
  
 
0.816
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
    
 0.782
KIAA0513
KIAA0513.
    
 0.782
ENSCWAP00000004227
annotation not available
    
 0.670
ENSCWAP00000000456
annotation not available
   
  
 0.639
SLC1A1
Solute carrier family 1 member 1.
      
 0.600
SLC1A7
Solute carrier family 1 member 7.
      
 0.595
GATM
Glycine amidinotransferase.
    
 0.559
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.