Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF615Zinc finger protein 615. (678 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.744
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  0.634
LRRK2
Leucine rich repeat kinase 2.
    
 
 0.600
KIAA0319
KIAA0319.
    
 
 0.598
SLC30A8
Solute carrier family 30 member 8.
      
 0.589
TUBD1
Tubulin delta 1.
    
 
 0.585
BRCA1
BRCA1 DNA repair associated.
    
 
 0.547
BLMH
Bleomycin hydrolase.
      
 0.512
WDR83
WD repeat domain 83.
    
 0.510
GART
annotation not available
     
  0.503
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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