STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA0408KIAA0408. (694 aa)    
Predicted Functional Partners:
PHF1
PHD finger protein 1.
    
   0.832
POLR3C
RNA polymerase III subunit C.
    
   0.832
ENSCWAP00000005135
annotation not available
 
 
  
 0.678
ZNF628
Zinc finger protein 628.
      
 0.652
MMACHC
Metabolism of cobalamin associated C.
      
 0.614
C6orf58
Chromosome 6 open reading frame 58.
      
 0.609
PTPRK
Protein tyrosine phosphatase receptor type K.
      
 0.585
SCARA5
Scavenger receptor class A member 5.
      
 0.585
ZNF84
Zinc finger protein 84.
      
 0.583
ABI3
ABI family member 3.
    
 
 0.568
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.