Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APOC3Apolipoprotein C3. (117 aa)    
Predicted Functional Partners:
APOA2
Apolipoprotein A2.
   
 0.999
APOC2
Apolipoprotein C2.
   
 
 0.998
APOA4
Apolipoprotein A4.
   
 
 0.992
APOB
Apolipoprotein B.
   
 
 0.992
APOE
Apolipoprotein E.
   
 
 0.982
APOA5
Apolipoprotein A5.
   
 
 0.967
APOH
Apolipoprotein H.
   
 
 0.959
LPL
Lipoprotein lipase.
    
 0.955
FABP1
Fatty acid binding protein 1.
   
  
 0.920
AHSG
Alpha 2-HS glycoprotein.
   
  
 0.882
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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