SPINK6 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SPINK6

Serine peptidase inhibitor, Kazal type 6. (80 aa)

Predicted Functional Partners:

ENSCWAP00000005124

0.887

DSTYK

0.887

FAM92B

0.864

KLK12

0.719

KLK13

0.719

KLK14

0.719

KLK5

0.705

KLK6

0.705

RHOH

0.692

ENSCWAP00000002687

0.604

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSTYK	ENSCWAP00000005124	ENSCWAP00000015967	ENSCWAP00000005124	Dual serine/threonine and tyrosine protein kinase.	annotation not available	0.615
DSTYK	FAM92B	ENSCWAP00000015967	ENSCWAP00000011635	Dual serine/threonine and tyrosine protein kinase.	Family with sequence similarity 92 member B.	0.609
DSTYK	RHOH	ENSCWAP00000015967	ENSCWAP00000022386	Dual serine/threonine and tyrosine protein kinase.	Ras homolog family member H.	0.677
DSTYK	SPINK6	ENSCWAP00000015967	ENSCWAP00000005176	Dual serine/threonine and tyrosine protein kinase.	Serine peptidase inhibitor, Kazal type 6.	0.887
ENSCWAP00000002687	FAM92B	ENSCWAP00000002687	ENSCWAP00000011635	annotation not available	Family with sequence similarity 92 member B.	0.422
ENSCWAP00000002687	KLK12	ENSCWAP00000002687	ENSCWAP00000015262	annotation not available	Kallikrein related peptidase 12.	0.695
ENSCWAP00000002687	KLK13	ENSCWAP00000002687	ENSCWAP00000015398	annotation not available	Kallikrein related peptidase 13.	0.695
ENSCWAP00000002687	KLK14	ENSCWAP00000002687	ENSCWAP00000015575	annotation not available	Kallikrein related peptidase 14.	0.695
ENSCWAP00000002687	KLK5	ENSCWAP00000002687	ENSCWAP00000014490	annotation not available	Kallikrein related peptidase 5.	0.581
ENSCWAP00000002687	KLK6	ENSCWAP00000002687	ENSCWAP00000014590	annotation not available	Kallikrein related peptidase 6.	0.582
ENSCWAP00000002687	SPINK6	ENSCWAP00000002687	ENSCWAP00000005176	annotation not available	Serine peptidase inhibitor, Kazal type 6.	0.604
ENSCWAP00000005124	DSTYK	ENSCWAP00000005124	ENSCWAP00000015967	annotation not available	Dual serine/threonine and tyrosine protein kinase.	0.615
ENSCWAP00000005124	FAM92B	ENSCWAP00000005124	ENSCWAP00000011635	annotation not available	Family with sequence similarity 92 member B.	0.582
ENSCWAP00000005124	RHOH	ENSCWAP00000005124	ENSCWAP00000022386	annotation not available	Ras homolog family member H.	0.692
ENSCWAP00000005124	SPINK6	ENSCWAP00000005124	ENSCWAP00000005176	annotation not available	Serine peptidase inhibitor, Kazal type 6.	0.887
FAM92B	DSTYK	ENSCWAP00000011635	ENSCWAP00000015967	Family with sequence similarity 92 member B.	Dual serine/threonine and tyrosine protein kinase.	0.609
FAM92B	ENSCWAP00000002687	ENSCWAP00000011635	ENSCWAP00000002687	Family with sequence similarity 92 member B.	annotation not available	0.422
FAM92B	ENSCWAP00000005124	ENSCWAP00000011635	ENSCWAP00000005124	Family with sequence similarity 92 member B.	annotation not available	0.582
FAM92B	RHOH	ENSCWAP00000011635	ENSCWAP00000022386	Family with sequence similarity 92 member B.	Ras homolog family member H.	0.650
FAM92B	SPINK6	ENSCWAP00000011635	ENSCWAP00000005176	Family with sequence similarity 92 member B.	Serine peptidase inhibitor, Kazal type 6.	0.864