STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO42F-box protein 42. (717 aa)    
Predicted Functional Partners:
SRP19
Signal recognition particle 19.
     
 0.846
CUL1
Cullin 1.
    
 
 0.824
ENSCWAP00000020733
annotation not available
   
 
  0.760
ENSCWAP00000021464
annotation not available
   
 
  0.760
FBXO47
F-box protein 47.
      
 0.704
ELOC
Elongin C.
    
  0.697
CUL5
Cullin 5.
    
 0.688
PTPN21
Protein tyrosine phosphatase non-receptor type 21.
      
 0.686
DRG1
Developmentally regulated GTP binding protein 1.
    
   0.672
CUL2
Cullin 2.
    
 0.666
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.