Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HELBDNA helicase B. (1071 aa)    
Predicted Functional Partners:
RPA1
Replication protein A1.
    
 0.968
RPA3
Replication protein A3.
    
 0.966
RPA2
Replication protein A2.
   
 0.868
FANCM
FA complementation group M.
   
 
 0.860
ENSCWAP00000005412
annotation not available
   
 
 0.803
ENSCWAP00000018833
annotation not available
   
 
 0.803
MEIOB
Meiosis specific with OB-fold.
    
 
 0.796
PCNA
Proliferating cell nuclear antigen.
  
 0.786
ENSCWAP00000017381
annotation not available
   
 0.755
DNA2
DNA replication helicase/nuclease 2.
   
 
 0.674
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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