STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCTD19Potassium channel tetramerization domain containing 19. (927 aa)    
Predicted Functional Partners:
WDR12
WD repeat domain 12.
   
 0.983
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.979
NOP58
NOP58 ribonucleoprotein.
  
 
 0.976
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 
 0.973
EBNA1BP2
EBNA1 binding protein 2.
   
 0.973
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 0.972
GTPBP4
GTP binding protein 4.
   
 
 0.971
PDCD11
Programmed cell death 11.
   
 0.969
GNL3
G protein nucleolar 3.
   
 0.968
GNL3L
G protein nucleolar 3 like.
   
 0.968
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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