STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRMT13tRNA methyltransferase 13 homolog. (481 aa)    
Predicted Functional Partners:
TRMT61A
tRNA methyltransferase 61A.
   
  
 0.755
REXO4
REX4 homolog, 3'-5' exonuclease.
   
  
 0.718
TRMT61B
tRNA methyltransferase 61B.
   
  
 0.706
DIMT1
DIMT1 rRNA methyltransferase and ribosome maturation factor.
   
  
 0.694
ENSCWAP00000004187
annotation not available
   
    0.681
DDX55
DEAD-box helicase 55.
   
    0.680
RTCA
RNA 3'-terminal phosphate cyclase.
   
  
 0.636
TRMT44
tRNA methyltransferase 44 homolog.
   
  
 0.633
C5orf22
Chromosome 5 open reading frame 22.
   
  
 0.624
DBT
Dihydrolipoamide branched chain transacylase E2.
      
 0.613
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.