STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE6DPhosphodiesterase 6D. (150 aa)    
Predicted Functional Partners:
INPP5E
Inositol polyphosphate-5-phosphatase E.
    
 0.996
ARL2
ADP ribosylation factor like GTPase 2.
   
 0.992
ARL3
ADP ribosylation factor like GTPase 3.
   
 0.989
ARL13B
ADP ribosylation factor like GTPase 13B.
     
 0.977
ARL16
ADP ribosylation factor like GTPase 16.
    
 
 0.969
ENSCWAP00000019577
annotation not available
    
 
 0.965
GUCY1B1
Guanylate cyclase 1 soluble subunit beta 1.
    
 0.944
ENSCWAP00000003134
annotation not available
    
 0.936
ARL13A
ADP ribosylation factor like GTPase 13A.
   
 0.926
PDE1C
Phosphodiesterase 1C.
     
 0.923
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.