STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO11F-box protein 11. (930 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
   
 0.989
SKP1
S-phase kinase associated protein 1.
    
 0.987
RBX1
Ring-box 1.
    
 0.977
ENSCWAP00000003807
annotation not available
    
 0.949
BCL6
BCL6 transcription repressor.
    
 
 0.938
CUL3
Cullin 3.
   
 0.914
PRDM1
PR/SET domain 1.
    
 
 0.885
TP53
Tumor protein p53.
    
 
 0.864
DTL
Denticleless E3 ubiquitin protein ligase homolog.
    
 
 0.847
ANKRD9
Ankyrin repeat domain 9.
     
 0.839
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.