Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE6BPhosphodiesterase 6B. (855 aa)    
Predicted Functional Partners:
PDE6G
Phosphodiesterase 6G.
   
 0.995
PDE6A
Phosphodiesterase 6A.
    
 0.988
GNAT1
G protein subunit alpha transducin 1.
   
 
 0.955
GNGT1
G protein subunit gamma transducin 1.
   
 
 0.943
NT5E
5'-nucleotidase ecto.
     
 0.939
ADCY3
Adenylate cyclase 3.
    
 0.935
GUCY2D
Guanylate cyclase 2D, retinal.
   
 0.935
GUCY2C
Guanylate cyclase 2C.
    
 0.931
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.929
GNB1
G protein subunit beta 1.
   
 
 0.927
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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