TOMM6 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TOMM6

Translocase of outer mitochondrial membrane 6. (74 aa)

Predicted Functional Partners:

TOMM7

0.998

ENSCWAP00000023221

0.998

TOMM40

0.995

TOMM70

0.994

ENSCWAP00000010089

0.978

ENSCWAP00000020781

0.978

TOMM40L

0.970

TOMM20L

0.964

TOMM20

0.964

ENSCWAP00000019714

0.942

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000010089	ENSCWAP00000019714	ENSCWAP00000010089	ENSCWAP00000019714	annotation not available	annotation not available	0.957
ENSCWAP00000010089	ENSCWAP00000023221	ENSCWAP00000010089	ENSCWAP00000023221	annotation not available	annotation not available	0.982
ENSCWAP00000010089	TOMM20	ENSCWAP00000010089	ENSCWAP00000023905	annotation not available	Translocase of outer mitochondrial membrane 20.	0.971
ENSCWAP00000010089	TOMM20L	ENSCWAP00000010089	ENSCWAP00000009588	annotation not available	Translocase of outer mitochondrial membrane 20 like.	0.971
ENSCWAP00000010089	TOMM40	ENSCWAP00000010089	ENSCWAP00000008157	annotation not available	Translocase of outer mitochondrial membrane 40.	0.992
ENSCWAP00000010089	TOMM40L	ENSCWAP00000010089	ENSCWAP00000018133	annotation not available	Translocase of outer mitochondrial membrane 40 like.	0.973
ENSCWAP00000010089	TOMM6	ENSCWAP00000010089	ENSCWAP00000005243	annotation not available	Translocase of outer mitochondrial membrane 6.	0.978
ENSCWAP00000010089	TOMM7	ENSCWAP00000010089	ENSCWAP00000001757	annotation not available	Translocase of outer mitochondrial membrane 7.	0.993
ENSCWAP00000010089	TOMM70	ENSCWAP00000010089	ENSCWAP00000017895	annotation not available	Translocase of outer mitochondrial membrane 70.	0.985
ENSCWAP00000019714	ENSCWAP00000010089	ENSCWAP00000019714	ENSCWAP00000010089	annotation not available	annotation not available	0.957
ENSCWAP00000019714	ENSCWAP00000020781	ENSCWAP00000019714	ENSCWAP00000020781	annotation not available	annotation not available	0.957
ENSCWAP00000019714	ENSCWAP00000023221	ENSCWAP00000019714	ENSCWAP00000023221	annotation not available	annotation not available	0.961
ENSCWAP00000019714	TOMM20	ENSCWAP00000019714	ENSCWAP00000023905	annotation not available	Translocase of outer mitochondrial membrane 20.	0.940
ENSCWAP00000019714	TOMM20L	ENSCWAP00000019714	ENSCWAP00000009588	annotation not available	Translocase of outer mitochondrial membrane 20 like.	0.940
ENSCWAP00000019714	TOMM40	ENSCWAP00000019714	ENSCWAP00000008157	annotation not available	Translocase of outer mitochondrial membrane 40.	0.893
ENSCWAP00000019714	TOMM40L	ENSCWAP00000019714	ENSCWAP00000018133	annotation not available	Translocase of outer mitochondrial membrane 40 like.	0.840
ENSCWAP00000019714	TOMM6	ENSCWAP00000019714	ENSCWAP00000005243	annotation not available	Translocase of outer mitochondrial membrane 6.	0.942
ENSCWAP00000019714	TOMM7	ENSCWAP00000019714	ENSCWAP00000001757	annotation not available	Translocase of outer mitochondrial membrane 7.	0.540
ENSCWAP00000019714	TOMM70	ENSCWAP00000019714	ENSCWAP00000017895	annotation not available	Translocase of outer mitochondrial membrane 70.	0.839
ENSCWAP00000020781	ENSCWAP00000019714	ENSCWAP00000020781	ENSCWAP00000019714	annotation not available	annotation not available	0.957