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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLCA2Colorectal cancer associated 2. (253 aa)    
Predicted Functional Partners:
WBP1L
WW domain binding protein 1 like.
      
 0.760
RLF
Rearranged L-myc fusion.
      
 0.759
C11orf53
Chromosome 11 open reading frame 53.
 
   
 0.721
ENSCWAP00000020239
annotation not available
      
 0.637
ENSCWAP00000026878
annotation not available
      
 0.637
MAP7D2
MAP7 domain containing 2.
      
 0.601
POU2AF1
POU class 2 homeobox associating factor 1.
      
 0.601
C11orf87
Chromosome 11 open reading frame 87.
      
 0.601
BTG4
BTG anti-proliferation factor 4.
      
 0.566
LAYN
Layilin.
      
 0.556
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.