Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000005272annotation not available (1886 aa)    
Predicted Functional Partners:
HCFC1
Host cell factor C1.
   
 0.918
HCFC2
Host cell factor C2.
   
 0.918
UCHL5
Ubiquitin C-terminal hydrolase L5.
    
 0.862
BAP1
BRCA1 associated protein 1.
    
 0.862
MCRS1
Microspherule protein 1.
    
 0.853
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
   0.815
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.814
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 
 0.787
SMG9
SMG9 nonsense mediated mRNA decay factor.
    
   0.749
TEX30
Testis expressed 30.
    
 0.732
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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