STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN8Tetraspanin 8. (236 aa)    
Predicted Functional Partners:
PIGR
Polymeric immunoglobulin receptor.
   
  0.974
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 0.850
SPATA18
Spermatogenesis associated 18.
      
 0.665
FCMR
Fc fragment of IgM receptor.
   
  0.657
CELSR3
Cadherin EGF LAG seven-pass G-type receptor 3.
      
 0.637
KLF3
Kruppel like factor 3.
      
 0.635
SYT13
Synaptotagmin 13.
     
 0.633
ODF1
Outer dense fiber of sperm tails 1.
      
 0.629
SPATA20
Spermatogenesis associated 20.
      
 0.622
ITGB1
Integrin subunit beta 1.
    
 0.619
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.