STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11orf53Chromosome 11 open reading frame 53. (288 aa)    
Predicted Functional Partners:
POU2F3
POU class 2 homeobox 3.
    
 
 0.950
POU2F1
POU class 2 homeobox 1.
    
 
 0.918
POU2F2
POU class 2 homeobox 2.
    
 
 0.903
POU1F1
POU class 1 homeobox 1.
    
 
 0.745
COLCA2
Colorectal cancer associated 2.
 
   
 0.713
POU3F4
POU class 3 homeobox 4.
    
 
 0.608
POU3F3
POU class 3 homeobox 3.
    
 
 0.608
POU3F2
POU class 3 homeobox 2.
    
 
 0.608
APCS
Amyloid P component, serum.
      
 0.602
AVIL
Advillin.
      
 0.587
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.