Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NCLNucleolin. (726 aa)    
Predicted Functional Partners:
NPM1
Nucleophosmin 1.
   
 
 0.997
RPL3
Ribosomal protein L3.
   
 0.978
SERBP1
SERPINE1 mRNA binding protein 1.
   
 
 0.965
LARP7
La ribonucleoprotein 7, transcriptional regulator.
    
 0.961
TP53
Tumor protein p53.
    
 
 0.956
ENSCWAP00000014383
annotation not available
   
  0.954
ENSCWAP00000017194
annotation not available
   
  0.954
RPL4
Ribosomal protein L4.
   
 0.953
RPL11
Ribosomal protein L11.
   
 0.951
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.950
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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