Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LDAHLipid droplet associated hydrolase. (329 aa)    
Predicted Functional Partners:
EPHX1
Epoxide hydrolase 1.
    
 
 0.888
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
    
   0.830
PPP1R12B
Protein phosphatase 1 regulatory subunit 12B.
    
   0.830
PPP1R12C
Protein phosphatase 1 regulatory subunit 12C.
    
   0.830
SMIM4
Small integral membrane protein 4.
      
 0.754
HS1BP3
HCLS1 binding protein 3.
      
 0.694
TMEM97
Transmembrane protein 97.
   
  
 0.598
ENDOD1
Endonuclease domain containing 1.
   
  
 0.595
TMEM238L
Transmembrane protein 238 like.
      
 0.591
TMEM238
Transmembrane protein 238.
      
 0.591
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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