Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHA4Pleckstrin homology domain containing A4. (779 aa)    
Predicted Functional Partners:
PLEKHA5
Pleckstrin homology domain containing A5.
    
 0.773
PRKAA1
Protein kinase AMP-activated catalytic subunit alpha 1.
    
 
 0.750
DMXL1
Dmx like 1.
    
 
 0.718
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.716
NUDT3
Nudix hydrolase 3.
    
 
 0.711
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.708
LATS1
Large tumor suppressor kinase 1.
    
 0.705
LATS2
Large tumor suppressor kinase 2.
    
 0.705
TMCO3
Transmembrane and coiled-coil domains 3.
      
 0.691
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.690
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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