close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX1PBX homeobox 1. (430 aa)    
Predicted Functional Partners:
HOXB1
Homeobox B1.
    
 0.920
MEIS2
Meis homeobox 2.
   
0.901
MEIS1
Meis homeobox 1.
   
0.901
HOXB5
Homeobox B5.
    
 0.840
PKNOX1
PBX/knotted 1 homeobox 1.
    
0.833
HOXC9
Homeobox C9.
    
 
 0.829
HOXB6
Homeobox B6.
    
 0.771
HOXB8
Homeobox B8.
    
 0.758
HOXD8
Homeobox D8.
    
 0.756
ENSCWAP00000019267
annotation not available
    
 0.756
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.