STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLX6Distal-less homeobox 6. (289 aa)    
Predicted Functional Partners:
DLX5
Distal-less homeobox 5.
   
 
 0.892
HAND2
Heart and neural crest derivatives expressed 2.
    
 
 0.590
RUNX2
RUNX family transcription factor 2.
   
 0.571
BMP4
Bone morphogenetic protein 4.
     
 0.558
BMP2
Bone morphogenetic protein 2.
     
 0.558
EDN1
Endothelin 1.
      
 0.554
RUNX1
RUNX family transcription factor 1.
   
 0.553
RUNX3
RUNX family transcription factor 3.
   
 0.553
FRAS1
Fraser extracellular matrix complex subunit 1.
      
 0.513
GDF7
Growth differentiation factor 7.
     
 0.510
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.