Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBLIFCobalamin binding intrinsic factor. (417 aa)    
Predicted Functional Partners:
CUBN
Cubilin.
    
 0.997
CDCP2
CUB domain containing protein 2.
    
 0.958
GALNT5
Polypeptide N-acetylgalactosaminyltransferase 5.
    
   0.882
ATP4B
ATPase H+/K+ transporting subunit beta.
   
  
 0.877
AMN
Amnion associated transmembrane protein.
     
 0.793
TFF2
Trefoil factor 2.
   
  
 0.778
PCOLCE
Procollagen C-endopeptidase enhancer.
    
 0.721
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
    
 0.721
ATP4A
ATPase H+/K+ transporting subunit alpha.
   
  
 0.648
CTRL
Chymotrypsin like.
   
 
 0.641
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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