STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A6Solute carrier family 38 member 6. (458 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
    0.831
NOCT
Nocturnin.
   
    0.795
SLC35C2
Solute carrier family 35 member C2.
   
  
 0.705
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.702
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.672
RRAGD
Ras related GTP binding D.
    
 0.657
ENSCWAP00000019315
annotation not available
    
  0.641
RRAGC
Ras related GTP binding C.
    
 0.638
RRAGA
Ras related GTP binding A.
    
 0.632
RRAGB
Ras related GTP binding B.
    
 0.632
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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