STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPINK7Serine peptidase inhibitor, Kazal type 7 (putative). (85 aa)    
Predicted Functional Partners:
LYPD2
LY6/PLAUR domain containing 2.
   
  
 0.980
MRPS12
Mitochondrial ribosomal protein S12.
    
 
 0.785
EPB42
Erythrocyte membrane protein band 4.2.
    
 
 0.771
RABL6
RAB, member RAS oncogene family like 6.
    
 
 0.768
ENSCWAP00000005868
annotation not available
      
 0.578
ADH4
Alcohol dehydrogenase 4 (class II), pi polypeptide.
      
 0.578
TRIM14
Tripartite motif containing 14.
      
 0.578
SFTA2
Surfactant associated 2.
      
 0.570
EAF2
ELL associated factor 2.
      
 0.566
HEPHL1
Hephaestin like 1.
      
 0.561
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.