STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000005408annotation not available (102 aa)    
Predicted Functional Partners:
PTMA
Prothymosin alpha.
    
 
 0.688
ZNF865
Zinc finger protein 865.
      
 0.605
EDIL3
EGF like repeats and discoidin domains 3.
      
 0.547
ENSCWAP00000015373
annotation not available
      
 0.532
ENSCWAP00000018590
annotation not available
      
 0.532
AGA
Aspartylglucosaminidase.
      
 0.515
ZNF316
Zinc finger protein 316.
      
 0.514
ROMO1
Reactive oxygen species modulator 1.
      
 0.465
HGD
Homogentisate 1,2-dioxygenase.
      
 0.465
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
      
 0.430
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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