Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RGP1RGP1 homolog, RAB6A GEF complex partner 1. (391 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.998
RAB6A
RAB6A, member RAS oncogene family.
    
 0.934
RAB6B
RAB6B, member RAS oncogene family.
    
 0.934
ENSCWAP00000004555
annotation not available
    
 0.907
RAB34
RAB34, member RAS oncogene family.
    
 0.890
RAB36
RAB36, member RAS oncogene family.
    
 0.890
ARL1
ADP ribosylation factor like GTPase 1.
    
  0.822
COG6
Component of oligomeric golgi complex 6.
    
 0.821
ARFRP1
ADP ribosylation factor related protein 1.
    
  0.801
RAB33B
RAB33B, member RAS oncogene family.
    
 0.801
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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