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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIK3SIK family kinase 3. (1267 aa)    
Predicted Functional Partners:
CRTC3
CREB regulated transcription coactivator 3.
    
 0.905
CRTC2
CREB regulated transcription coactivator 2.
    
 0.848
SCGN
Secretagogin, EF-hand calcium binding protein.
   
 0.774
COL2A1
Collagen type II alpha 1 chain.
    
 
 0.761
DMBX1
Diencephalon/mesencephalon homeobox 1.
      
 0.747
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 
 0.713
MCM2
Minichromosome maintenance complex component 2.
    
 
 0.710
THRA
Thyroid hormone receptor alpha.
    
 
 0.697
GOLGB1
Golgin B1.
    
 
 0.659
CASK
Calcium/calmodulin dependent serine protein kinase.
   
0.642
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.