Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MNAT1MNAT1 component of CDK activating kinase. (309 aa)    
Predicted Functional Partners:
CDK7
Cyclin dependent kinase 7.
   
 0.999
CCNH
Cyclin H.
   
 0.999
GTF2H4
General transcription factor IIH subunit 4.
    
 0.997
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.996
GTF2H1
General transcription factor IIH subunit 1.
    
 0.996
ENSCWAP00000002207
annotation not available
   
 0.994
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.994
GTF2H3
General transcription factor IIH subunit 3.
   
 0.992
GTF2E2
General transcription factor IIE subunit 2.
   
 0.986
GTF2E1
General transcription factor IIE subunit 1.
    
 0.984
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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