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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A13Solute carrier family 25 member 13. (675 aa)    
Predicted Functional Partners:
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
      
 0.740
MICU1
Mitochondrial calcium uptake 1.
     
0.717
SLC25A12
Solute carrier family 25 member 12.
  
 
 
0.653
RALGAPA2
Ral GTPase activating protein catalytic alpha subunit 2.
      
 0.645
RALGAPA1
Ral GTPase activating protein catalytic alpha subunit 1.
      
 0.645
TIMM22
Translocase of inner mitochondrial membrane 22.
     
 0.641
TIMM17B
Translocase of inner mitochondrial membrane 17B.
      
 0.624
SLC34A2
Solute carrier family 34 member 2.
      
 0.617
MCU
Mitochondrial calcium uniporter.
     
 0.606
TIMM8B
Translocase of inner mitochondrial membrane 8 homolog B.
     
 0.605
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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