STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000005565annotation not available (759 aa)    
Predicted Functional Partners:
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.952
CNOT11
CCR4-NOT transcription complex subunit 11.
   
   0.949
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.948
CNOT10
CCR4-NOT transcription complex subunit 10.
    
   0.943
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.942
GADD45B
Growth arrest and DNA damage inducible beta.
    
   0.941
PTBP3
Polypyrimidine tract binding protein 3.
   
 0.940
VCL
Vinculin.
    
 
 0.903
CNOT1
CCR4-NOT transcription complex subunit 1.
    
   0.853
TOB1
Transducer of ERBB2, 1.
    
   0.852
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.