Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAV20T cell receptor alpha variable 20. (130 aa)    
Predicted Functional Partners:
SYK
Spleen associated tyrosine kinase.
    
 0.644
ZAP70
Zeta chain of T cell receptor associated protein kinase 70.
    
 0.644
CD3G
CD3g molecule.
     
  0.620
ENSCWAP00000008046
annotation not available
   
 
 0.606
CD247
CD247 molecule.
     
 0.599
C1QC
Complement C1q C chain.
   
  0.582
FCER1G
Fc fragment of IgE receptor Ig.
    
  0.581
FCAR
Fc fragment of IgA receptor.
    
  0.581
CD3D
CD3d molecule.
     
  0.580
TRAV16
T cell receptor alpha variable 16.
  
  
  0.576
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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