STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MDFIMyoD family inhibitor. (246 aa)    
Predicted Functional Partners:
OTX1
Orthodenticle homeobox 1.
    
   0.922
ENSCWAP00000009174
annotation not available
    
   0.905
SPRY1
Sprouty RTK signaling antagonist 1.
    
 
 0.863
BBS2
Bardet-Biedl syndrome 2.
    
   0.862
ZFYVE26
Zinc finger FYVE-type containing 26.
    
   0.855
NEU4
Neuraminidase 4.
    
   0.816
FAM124B
Family with sequence similarity 124 member B.
    
   0.794
PBXIP1
PBX homeobox interacting protein 1.
    
   0.789
ENSCWAP00000025595
annotation not available
    
   0.770
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
    
 
 0.764
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.