STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000005587annotation not available (106 aa)    
Predicted Functional Partners:
RPL23
Ribosomal protein L23.
   
 0.997
RPL8
Ribosomal protein L8.
   
 0.996
ENSCWAP00000013110
annotation not available
   
 0.996
ENSCWAP00000013956
annotation not available
   
 0.996
RPL27
Ribosomal protein L27.
   
 0.996
RPL34
Ribosomal protein L34.
   
 0.995
RPL37
Ribosomal protein L37.
   
 0.994
RPL11
Ribosomal protein L11.
   
 0.994
RPL21
Ribosomal protein L21.
   
 0.994
RPL13
Ribosomal protein L13.
   
 0.993
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.