STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CA6Carbonic anhydrase 6. (291 aa)    
Predicted Functional Partners:
BPIFA2
BPI fold containing family A member 2.
   
  
 0.885
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
  
 0.810
RPF2
Ribosome production factor 2 homolog.
   
 
 0.703
CHST8
Carbohydrate sulfotransferase 8.
      
 0.650
CA10
Carbonic anhydrase 10.
  
   
0.644
CNTFR
Ciliary neurotrophic factor receptor.
      
 0.642
CHST9
Carbohydrate sulfotransferase 9.
      
 0.628
C6orf58
Chromosome 6 open reading frame 58.
   
  
 0.624
WDR43
WD repeat domain 43.
   
    0.593
TMEM201
Transmembrane protein 201.
      
 0.592
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.