STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000005603annotation not available (923 aa)    
Predicted Functional Partners:
PAM16
Presequence translocase associated motor 16.
 
   
  0.884
KLHL20
Kelch like family member 20.
    
 
 0.824
KLHL28
Kelch like family member 28.
    
 
 0.782
RNF166
Ring finger protein 166.
      
 0.774
DNAJC19
DnaJ heat shock protein family (Hsp40) member C19.
    
  0.761
DNAJC15
DnaJ heat shock protein family (Hsp40) member C15.
    
  0.757
C3orf18
Chromosome 3 open reading frame 18.
    
  0.752
KBTBD8
Kelch repeat and BTB domain containing 8.
    
 
 0.658
ENSCWAP00000026246
annotation not available
    
 
 0.637
LRSAM1
Leucine rich repeat and sterile alpha motif containing 1.
      
 0.603
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.