STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN5Claudin 5. (218 aa)    
Predicted Functional Partners:
CDH5
Cadherin 5.
   
  
 0.997
ESAM
Endothelial cell adhesion molecule.
   
 
 0.986
TJP1
Tight junction protein 1.
    
 0.982
OCLN
Occludin.
    
 0.977
CLDN12
Claudin 12.
     
 0.950
CLDN16
Claudin 16.
    
 0.946
TJP3
Tight junction protein 3.
    
 0.937
VWF
Von Willebrand factor.
   
  
 0.932
ENSCWAP00000025033
annotation not available
    
 0.923
SOX18
SRY-box transcription factor 18.
   
  
 0.907
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.