Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TTC34Tetratricopeptide repeat domain 34. (566 aa)    
Predicted Functional Partners:
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
      
 0.754
MIS12
MIS12 kinetochore complex component.
      
 0.713
PLCH2
Phospholipase C eta 2.
      
 0.700
CBY2
Chibby family member 2.
      
 0.692
CPB2
Carboxypeptidase B2.
      
 0.653
GFOD1
Glucose-fructose oxidoreductase domain containing 1.
    
 
 0.602
LRRC63
Leucine rich repeat containing 63.
      
 0.589
CFAP74
Cilia and flagella associated protein 74.
   
  
 0.588
SIAH3
Siah E3 ubiquitin protein ligase family member 3.
      
 0.586
ENSCWAP00000014683
annotation not available
      
 0.585
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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